MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,645
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 79
misc RNA:
Total features: 4,735
Total number of protein coding genes annotated/found:
4,645
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5033|JADGMH010000005.1
SEQF5033_03808
Genome Viewer
NA
AA
111/37
277188-277078
hypothetical protein
SEQF5033|JADGMH010000014.1
SEQF5033_00621
Genome Viewer
NA
AA
114/38
114387-114274
Cytochrome bd-I ubiquinol oxidase subunit X
SEQF5033|JADGMH010000034.1
SEQF5033_02629
Genome Viewer
NA
AA
114/38
1477-1590
hypothetical protein
SEQF5033|JADGMH010000004.1
SEQF5033_03186
Genome Viewer
NA
AA
114/38
26893-26780
putative protein YceO
SEQF5033|JADGMH010000027.1
SEQF5033_02037
Genome Viewer
NA
AA
117/39
13888-13772
50S ribosomal protein L36
SEQF5033|JADGMH010000045.1
SEQF5033_03137
Genome Viewer
NA
AA
117/39
1641-1525
hypothetical protein
SEQF5033|JADGMH010000007.1
SEQF5033_04128
Genome Viewer
NA
AA
117/39
43002-43118
hypothetical protein
SEQF5033|JADGMH010000003.1
SEQF5033_03023
Genome Viewer
NA
AA
120/40
334030-333911
Methyl-accepting chemotaxis protein IV
SEQF5033|JADGMH010000060.1
SEQF5033_03821
Genome Viewer
NA
AA
120/40
650-769
hypothetical protein
SEQF5033|JADGMH010000063.1
SEQF5033_03827
Genome Viewer
NA
AA
120/40
1100-1219
hypothetical protein
SEQF5033|JADGMH010000032.1
SEQF5033_02584
Genome Viewer
NA
AA
123/41
6822-6944
hypothetical protein
SEQF5033|JADGMH010000036.1
SEQF5033_02660
Genome Viewer
NA
AA
123/41
3818-3696
hypothetical protein
SEQF5033|JADGMH010000015.1
SEQF5033_00650
Genome Viewer
NA
AA
126/42
36340-36465
putative protein YqfG
SEQF5033|JADGMH010000088.1
SEQF5033_04328
Genome Viewer
NA
AA
126/42
201-326
hypothetical protein
SEQF5033|JADGMH010000008.1
SEQF5033_04541
Genome Viewer
NA
AA
126/42
224628-224503
hypothetical protein
SEQF5033|JADGMH010000014.1
SEQF5033_00540
Genome Viewer
NA
AA
129/43
35471-35599
Small protein MntS
SEQF5033|JADGMH010000001.1
SEQF5033_01469
Genome Viewer
NA
AA
129/43
376517-376645
hypothetical protein
SEQF5033|JADGMH010000029.1
SEQF5033_02114
Genome Viewer
NA
AA
129/43
6130-6258
hypothetical protein
SEQF5033|JADGMH010000004.1
SEQF5033_03453
Genome Viewer
NA
AA
129/43
273600-273728
Protein YmiA
SEQF5033|JADGMH010000007.1
SEQF5033_04296
Genome Viewer
NA
AA
129/43
236269-236397
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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